Release
Cytoscape 3.10.3 Now Available
The latest update brings improved performance for large-scale networks and new KEGG pathway integration features.
March 5, 2026Read More
Open Source BioinformaticsCytoscape
Cytoscape
Consortium
Promoting the development and distribution of open source bioinformatic software related to biological networks — empowering researchers worldwide.
Our ImpactEmpowering Global
Empowering Global
Network Biology Research
The Cytoscape Consortium provides researchers and institutions with the tools, resources, and community support needed to advance biological network analysis. From desktop applications to web libraries, we build the infrastructure for modern bioinformatics.
Read our mission15,000+
Active Researchers Worldwide
300+
Community-Built Apps
50+
Contributing Institutions
20+
Years of Innovation
Our Software
Open Source Solutions
Powerful, community-driven tools for biological network visualization and analysis.
Cytoscape Desktop
The flagship desktop application for visualizing and analyzing complex biological networks with hundreds of plugin apps.
Learn MoreCytoscape.js
A fully-featured graph library written in pure JavaScript for the web. Integrates seamlessly with modern frameworks.
Learn Morepy4cytoscape
Python library for communicating with Cytoscape Desktop, enabling automation of network analysis workflows.
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Ready to Explore the Network?
Join thousands of researchers using Cytoscape tools to discover new insights in biological data.
Latest Updates
View All News & Announcements
Event
Cytoscape Workshop at ISMB 2026
Join our hands-on workshop at the Intelligent Systems for Molecular Biology conference this July in Montreal.
February 18, 2026Read More
Publication
New Study Uses Cytoscape for Cancer Network Analysis
Researchers at UCSD published findings using Cytoscape to map protein interactions in triple-negative breast cancer.
January 30, 2026Read More